NA
Nasopharyngeal swab. Place in 1-2 mL universal viral transport media.
BAL, sputum, tracheal aspirates, and throat swabs.
Refrigerated.
Microbiology Department
Test performed daily on all shifts. Reported on same shift received. During peak season, results will be available within 24 hours of receipt.
Microbiology Department
Test performed daily on all shifts. Reported on same shift received. During peak season, results will be available within 24 hours of receipt.
PCR
Reported as Detected, Not Detected or Equivocal
The Microbiology Clinical Laboratory implemented a change in methodology for respiratory viral testing by PCR. The respiratory viral molecular test has been changed to the Biofire FilmArray Respiratory Pathogen Panel (RESPP). The RESPP is a multiplexed molecular test that will qualitatively detect and identify different respiratory pathogens simultaneously. The respiratory viruses detected include adenovirus, coronavirus (229E, OC43, NL63 and HKU1), SARS-CoV-2, Influenza A virus (with subtyping for H1, 2009 H1 and H3), Influenza B virus, human metapneumovirus, parainfluenza virus (1, 2, 3, and 4), human rhinovirus/enterovirus, and respiratory syncytial virus (RSV). The bacterial pathogens detected are Bordetella pertussis, Bordetella parapertussis, Chlamydophila pneumoniae, and Mycoplasma pneumoniae.
Please note the direct antigen tests for influenza type A/type B and RSV are available for rapid screening when clinically indicated (Influenza type A & type B Antigen Detection; RSV Direct Antigen Detection).
OrderCode | OrderName | ResultCode | ResultName | Result Units | LOINC | CPT |
RESPP | RESP PATH PANEL PCR | ADEN | ADENOVIRUS | 82160-3 | 0202U | |
RESPP | RESP PATH PANEL PCR | CV229E | CORONAVIRUS 229E | 82163-7 | ||
RESPP | RESP PATH PANEL PCR | CVHKU1 | CORONAVIRUS HKU1 | 82161-1 | ||
RESPP | RESP PATH PANEL PCR | CVNL63 | CORONAVIRUS NL63 | 82162-9 | ||
RESPP | RESP PATH PANEL PCR | CVOC43 | CORONAVIRUS OC43 | 82164-5 | ||
RESPP | RESP PATH PANEL PCR | SARSV2 | SARS-CoV-2 | 94565-9 | ||
RESPP | RESP PATH PANEL PCR | HMETAP | METAPNEUMOVIRUS | 82165-2 | ||
RESPP | RESP PATH PANEL PCR | HRHENT | RHINOVIRUS/ENTEROVIRUS | 82175-1 | ||
RESPP | RESP PATH PANEL PCR | IVA | INFLUENZA TYPE A | 82166-0 | ||
RESPP | RESP PATH PANEL PCR | IV2009 | INFLU 2009A-H1N1v | 82168-6 | ||
RESPP | RESP PATH PANEL PCR | IVAH1 | INFLU A SUBTYPE H1 | 82167-8 | ||
RESPP | RESP PATH PANEL PCR | IVAH3 | INFLU A SUBTYPE H3 | 82169-4 | ||
RESPP | RESP PATH PANEL PCR | IVB | INFLUENZA TYPE B | 82170-2 | ||
RESPP | RESP PATH PANEL PCR | PARAV1 | PARAINFLUENZA 1 | 82171-0 | ||
RESPP | RESP PATH PANEL PCR | PARAV2 | PARAINFLUENZA 2 | 82172-8 | ||
RESPP | RESP PATH PANEL PCR | PARAV3 | PARAINFLUENZA 3 | 82173-6 | ||
RESPP | RESP PATH PANEL PCR | PARAV4 | PARAINFLUENZA 4 | 82174-4 | ||
RESPP | RESP PATH PANEL PCR | RESYV | RESP SYNCYTIAL VIRUS | 82176-9 | ||
RESPP | RESP PATH PANEL PCR | BORPER | BORDETELLA PERTUSSIS | 82179-3 | ||
RESPP | RESP PATH PANEL PCR | BORPAR | BORDETELLA PARAPERTUSSIS (IS1001) | 87621-9 | ||
RESPP | RESP PATH PANEL PCR | CHLPNE | CHLAMYDOPHILA PNEUMONIAE | 82178-5 | ||
RESPP | RESP PATH PANEL PCR | MYCPNE | MYCOPLASMA PNEUMONIAE | 82177-7 | ||
RESPP | RESP PATH PANEL PCR | RVPSRC | Source | 31208-2 | ||
RESPP | RESP PATH PANEL PCR | RVPCOM | Comment |
Collection |
NA
Nasopharyngeal swab. Place in 1-2 mL universal viral transport media.
BAL, sputum, tracheal aspirates, and throat swabs.
Refrigerated.
Microbiology Department
Test performed daily on all shifts. Reported on same shift received. During peak season, results will be available within 24 hours of receipt.
Ordering |
Microbiology Department
Test performed daily on all shifts. Reported on same shift received. During peak season, results will be available within 24 hours of receipt.
PCR
Result Interpretation |
Reported as Detected, Not Detected or Equivocal
The Microbiology Clinical Laboratory implemented a change in methodology for respiratory viral testing by PCR. The respiratory viral molecular test has been changed to the Biofire FilmArray Respiratory Pathogen Panel (RESPP). The RESPP is a multiplexed molecular test that will qualitatively detect and identify different respiratory pathogens simultaneously. The respiratory viruses detected include adenovirus, coronavirus (229E, OC43, NL63 and HKU1), SARS-CoV-2, Influenza A virus (with subtyping for H1, 2009 H1 and H3), Influenza B virus, human metapneumovirus, parainfluenza virus (1, 2, 3, and 4), human rhinovirus/enterovirus, and respiratory syncytial virus (RSV). The bacterial pathogens detected are Bordetella pertussis, Bordetella parapertussis, Chlamydophila pneumoniae, and Mycoplasma pneumoniae.
Please note the direct antigen tests for influenza type A/type B and RSV are available for rapid screening when clinically indicated (Influenza type A & type B Antigen Detection; RSV Direct Antigen Detection).
Administrative |
RPS Interface Information |
OrderCode | OrderName | ResultCode | ResultName | Result Units | LOINC | CPT |
RESPP | RESP PATH PANEL PCR | ADEN | ADENOVIRUS | 82160-3 | 0202U | |
RESPP | RESP PATH PANEL PCR | CV229E | CORONAVIRUS 229E | 82163-7 | ||
RESPP | RESP PATH PANEL PCR | CVHKU1 | CORONAVIRUS HKU1 | 82161-1 | ||
RESPP | RESP PATH PANEL PCR | CVNL63 | CORONAVIRUS NL63 | 82162-9 | ||
RESPP | RESP PATH PANEL PCR | CVOC43 | CORONAVIRUS OC43 | 82164-5 | ||
RESPP | RESP PATH PANEL PCR | SARSV2 | SARS-CoV-2 | 94565-9 | ||
RESPP | RESP PATH PANEL PCR | HMETAP | METAPNEUMOVIRUS | 82165-2 | ||
RESPP | RESP PATH PANEL PCR | HRHENT | RHINOVIRUS/ENTEROVIRUS | 82175-1 | ||
RESPP | RESP PATH PANEL PCR | IVA | INFLUENZA TYPE A | 82166-0 | ||
RESPP | RESP PATH PANEL PCR | IV2009 | INFLU 2009A-H1N1v | 82168-6 | ||
RESPP | RESP PATH PANEL PCR | IVAH1 | INFLU A SUBTYPE H1 | 82167-8 | ||
RESPP | RESP PATH PANEL PCR | IVAH3 | INFLU A SUBTYPE H3 | 82169-4 | ||
RESPP | RESP PATH PANEL PCR | IVB | INFLUENZA TYPE B | 82170-2 | ||
RESPP | RESP PATH PANEL PCR | PARAV1 | PARAINFLUENZA 1 | 82171-0 | ||
RESPP | RESP PATH PANEL PCR | PARAV2 | PARAINFLUENZA 2 | 82172-8 | ||
RESPP | RESP PATH PANEL PCR | PARAV3 | PARAINFLUENZA 3 | 82173-6 | ||
RESPP | RESP PATH PANEL PCR | PARAV4 | PARAINFLUENZA 4 | 82174-4 | ||
RESPP | RESP PATH PANEL PCR | RESYV | RESP SYNCYTIAL VIRUS | 82176-9 | ||
RESPP | RESP PATH PANEL PCR | BORPER | BORDETELLA PERTUSSIS | 82179-3 | ||
RESPP | RESP PATH PANEL PCR | BORPAR | BORDETELLA PARAPERTUSSIS (IS1001) | 87621-9 | ||
RESPP | RESP PATH PANEL PCR | CHLPNE | CHLAMYDOPHILA PNEUMONIAE | 82178-5 | ||
RESPP | RESP PATH PANEL PCR | MYCPNE | MYCOPLASMA PNEUMONIAE | 82177-7 | ||
RESPP | RESP PATH PANEL PCR | RVPSRC | Source | 31208-2 | ||
RESPP | RESP PATH PANEL PCR | RVPCOM | Comment |